Publications

From the Beckman group:

Shaw JB, Cooper-Shepherd DA, Hewitt D, Wildgoose JL, Beckman JS, Langridge JI, Voinov VG.

Enhanced Top-Down Protein Characterization with Electron Capture Dissociation and Cyclic Ion Mobility Spectrometry.

Anal Chem. 2022 Mar 8;94(9):3888-3896. doi: 10.1021/acs.analchem.1c04870. Epub 2022 Feb 21. PMID: 35188751.
From the Gombart group:

Su Y, Ganguli-Indra G, Bhattacharya N, Logan IE, Indra AK, Gombart AF, Wong SL, Xie J.

Codelivery of 1α,25-Dihydroxyvitamin D3 and CYP24A1 Inhibitor VID400 by Nanofiber Dressings Promotes Endogenous Antimicrobial Peptide LL-37 Induction.

Mol Pharm. 2022 Mar 7;19(3):974-984. doi: 10.1021/acs.molpharmaceut.1c00944. Epub 2022 Feb 18. PMID: 35179903.
From the Barbar group:

Mostofian B, McFarland R, Estelle A, Howe J, Barbar E, Reichow SL, Zuckerman DM.

Continuum dynamics and statistical correction of compositional heterogeneity in multivalent IDP oligomers resolved by single-particle EM.

J Mol Biol. 2022 Mar 1:167520. doi: 10.1016/j.jmb.2022.167520. Epub ahead of print. PMID: 35245498.
From the Franco group:

Poderoso C, Filippi BM, Maloberti PM, Franco MC.

Mitochondrial Dynamics in Endocrine Physiology and Disease.

Front Endocrinol (Lausanne) 2022 Feb 16;13:844842. doi: 10.3389/fendo.2022.844842. PMID: 35250891; PMCID: PMC8889580.
From the Barbar group:

Estelle A, George A, Barbar E, Zuckerman DM.

Quantifying thermodynamic parameters of multi-step binding using a novel approach to Bayesian inference.

Biophys J. 2022 Feb 11;121(3):134A. doi: 10.1016/j.bpj.2021.11.2052.
From the Gombart group:

Carr AC, Gombart AF.

Multi-Level Immune Support by Vitamins C and D during the SARS-CoV-2 Pandemic.

Nutrients. 2022 Feb 6;14(3):689. doi: 10.3390/nu14030689. PMCID: PMC8840673.
From the Franco group:

Jandy M, Noor A, Nelson P, Dennys CN, Karabinas IM, Pestoni JC, Singh GD, Luc L, Devyldere R, Perdomo N, Mitchell CE, Adams L, Fuse MA, Mendoza FA, Marean-Reardon CL, Mehl RA, Estevez AG, Franco MC.

Peroxynitrite nitration of Tyr 56 in Hsp90 induces PC12 cell death through P2X7R-dependent PTEN activation.

Redox Biol. 2022 Jan 26;50:102247. doi: 10.1016/j.redox.2022.102247. Epub ahead of print. PMID: 35121403; PMCID: PMC8818572.
From the Hagen group:

Visioli F, Ingram A, Beckman JS, Magnusson KR, Hagen TM.

Strategies to protect against age-related mitochondrial decay: Do natural products and their derivatives help?

Free Radic Biol Med. 2022 Feb 6;14(3):689. doi: 10.3390/nu14030689. PMCID: PMC8840673.
From the Hagen group:

Visioli F, Ingram A, Beckman JS, Magnusson KR, Hagen TM.

Strategies to protect against age-related mitochondrial decay: Do natural products and their derivatives help?

Free Radic Biol Med. 2022 Jan;178:330-346. doi: 10.1016/j.freeradbiomed.2021.12.008. Epub 2021 Dec 8.PMID: 34890770
From the Hagen group:

Rodríguez E, Radke A, Hagen TM, Blier PU.

Supercomplex organization of the electron transfer system in marine bivalves, a model of extreme longevity.

J Gerontol A Biol Sci Med Sci. 2021 Dec 6:glab363. doi: 10.1093/gerona/glab363. Epub ahead of print. PMID: 34871395.
From the Gombart group:

Logan IE, Shulzhenko N, Sharpton TJ, Bobe G, Liu K, Nuss S, Jones ML, Miranda CL, Vasquez-Perez S, Pennington JM, Leonard SW, Choi J, Wu W, Gurung M, Kim JP, Lowry MB, Morgun A, Maier CS, Stevens JF, Gombart AF

Xanthohumol Requires the Intestinal Microbiota to Improve Glucose Metabolism in Diet-Induced Obese Mice.

Mol Nutr Food Res. 2021 Nov;65(21):e2100389. doi: 10.1002/mnfr.202100389. Epub 2021 Oct 12. PMID: 34496124; PMCID: PMC8571065.
From the Barbar group:

Rodriguez Galvan J, Donner B, Veseley CH, Reardon P, Forsythe HM, Howe J, Fujimura G, Barbar E.

Human Parainfluenza Virus 3 Phosphoprotein Is a Tetramer and Shares Structural and Interaction Features with Ebola Phosphoprotein VP35.

Biomolecules 2021 Oct 29; 11(11):1603. https://doi.org/10.3390/biom11111603
From the Cooley group:

Sluchanko NN, Tugaeva KV, Gushchin I, Remeeva A, Kovalev K, Cooley RB.

Crystal structure of human 14-3-3ζ complexed with the noncanonical phosphopeptide from proapoptotic BAD.

Biochem Biophys Res Commun. 2021 Oct 26;583:100-105. doi: 10.1016/j.bbrc.2021.10.053. Epub ahead of print. PMID: 34735870.
From the Mehl group:

Zagotta WN, Sim BS, Nhim AK, Raza MM, Evans EG, Venkatesh Y, Jones CM, Mehl RA, Petersson EJ, Gordon SE.

An improved fluorescent noncanonical amino acid for measuring conformational distributions using time-resolved transition metal ion FRET.

Elife. 2021 Oct 8;10:e70236. doi: 10.7554/eLife.70236. PMID: 34623258; PMCID: PMC8500717.
From the Mehl and Cooley group:

Bednar RM, Jana S, Kuppa S, Franklin R, Beckman J, Antony E, Cooley RB, Mehl RA.

Genetic Incorporation of Two Mutually Orthogonal Bioorthogonal Amino Acids That Enable Efficient Protein Dual-Labeling in Cells.

ACS Chem Biol. 2021 Sep 30. doi: 10.1021/acschembio.1c00649. Epub ahead of print. PMID: 34590824.

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Biochemistry and Biophysics

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Enhanced Top-Down Protein Characterization with Electron Capture Dissociation and Cyclic Ion Mobility Spectrometry.

Codelivery of 1α,25-Dihydroxyvitamin D3 and CYP24A1 Inhibitor VID400 by Nanofiber Dressings Promotes Endogenous Antimicrobial Peptide LL-37 Induction.

Continuum dynamics and statistical correction of compositional heterogeneity in multivalent IDP oligomers resolved by single-particle EM.

Mitochondrial Dynamics in Endocrine Physiology and Disease.

Quantifying thermodynamic parameters of multi-step binding using a novel approach to Bayesian inference.

Multi-Level Immune Support by Vitamins C and D during the SARS-CoV-2 Pandemic.

Peroxynitrite nitration of Tyr 56 in Hsp90 induces PC12 cell death through P2X7R-dependent PTEN activation.

Strategies to protect against age-related mitochondrial decay: Do natural products and their derivatives help?

Strategies to protect against age-related mitochondrial decay: Do natural products and their derivatives help?

Supercomplex organization of the electron transfer system in marine bivalves, a model of extreme longevity.

Xanthohumol Requires the Intestinal Microbiota to Improve Glucose Metabolism in Diet-Induced Obese Mice.

Human Parainfluenza Virus 3 Phosphoprotein Is a Tetramer and Shares Structural and Interaction Features with Ebola Phosphoprotein VP35.

Crystal structure of human 14-3-3ζ complexed with the noncanonical phosphopeptide from proapoptotic BAD.

An improved fluorescent noncanonical amino acid for measuring conformational distributions using time-resolved transition metal ion FRET.

Genetic Incorporation of Two Mutually Orthogonal Bioorthogonal Amino Acids That Enable Efficient Protein Dual-Labeling in Cells.

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