Publications

From the Mathews group:

Mathews CK. (2019)

Deoxyribonucleotide salvage falls short in whole animals.

J Biol Chem. Nov 1;294(44):15898-15899. doi: 10.1074/jbc.H119.011335.
From the Barbar group:

Jespersen NE, Leyrat C, Gérard FC, Bourhis JM, Blondel D, Jamin M, Barbar E. (2019)

The LC8-RavP ensemble structure evinces a role for LC8 in regulating Lyssavirus polymerase functionality.

J Mol Biol. Oct 18. pii: S0022-2836(19)30607-2. doi: 10.1016/j.jmb.2019.10.011. [Epub ahead of print]
From the Mehl group:

Tugaeva KV, Kalacheva DI, Cooley RB, Strelkov SV, Sluchanko NN. (2019)

Concatenation of 14-3-3 with partner phosphoproteins as a tool to study their interaction.

Sci Rep. Oct 18;9(1):15007. doi: 10.1038/s41598-019-50941-3.
From the Hendrix group:

Bell J, Larson M, Kutzler M, Bionaz M, Löhr CV, Hendrix D. (2019)

miRWoods: Enhanced precursor detection and stacked random forests for the sensitive detection of microRNAs.

PLoS Comput Biol. Oct 9;15(10):e1007309. doi: 10.1371/journal.pcbi.1007309. eCollection 2019 Oct.
From the Johnson group:

Golbek TW, Padmanarayana M, Roeters SJ, Weidner T, Johnson CP, Baio JE. (2019)

Otoferlin C2F Domain-Induced Changes in Membrane Structure Observed by Sum Frequency Generation.

Biophys J. Sep 17. pii: S0006-3495(19)30784-2. doi: 10.1016/j.bpj.2019.09.010. [Epub ahead of print]
From the Johnson group:

Manchanda A, Chatterjee P, Bonventre JA, Haggard DE, Kindt KS, Tanguay RL, Johnson CP. (2019)

Otoferlin Depletion Results in Abnormal Synaptic Ribbons and Altered Intracellular Calcium Levels in Zebrafish.

Sci Rep. Oct 3;9(1):14273. doi: 10.1038/s41598-019-50710-2.
From the Mehl group:

Bednar RM, Golbek TW, Kean KM, Brown WJ, Jana S, Baio JE, Karplus PA, Mehl RA. (2019)

Immobilization of Proteins with Controlled Load and Orientation.

ACS Appl Mater Interfaces. Sep 26. doi: 10.1021/acsami.9b12746.
From the Hendrix group:

Huang L, Zhang H, Deng D, Zhao K, Liu K, Hendrix DA, Mathews DH. (2019)

LinearFold: linear-time approximate RNA folding by 5'-to-3' dynamic programming and beam search.

Bioinformatics. Jul 15;35(14):i295-i304. doi: 10.1093/bioinformatics/btz375.
From the Gombart group:

Kulkarni NN, Takahashi T, Sanford JA, Tong Y, Gombart AF, Hinds B, Cheng JY, Gallo RL. (2019)

Innate immune dysfunction in rosacea promotes photosensitivity and vascular adhesion molecule expression.

J Invest Dermatol. Aug 28. pii: S0022-202X(19)33154-9. doi: 10.1016/j.jid.2019.08.436. [Epub ahead of print]
From the Hendrix group:

Ritter N, Ali T, Kopitchinski N, Schuster P, Beisaw A, Hendrix DA, Schulz MH, Müller-McNicoll M, Dimmeler S, Grote P. (2019)

The lncRNA Locus Handsdown Regulates Cardiac Gene Programs and Is Essential for Early Mouse Development.

Dev Cell. Aug 12. pii: S1534-5807(19)30585-4. doi: 10.1016/j.devcel.2019.07.013. [Epub ahead of print]
From the Beckman group:

Kovacs M, Trias E, Varela V, Ibarburu S, Beckman JS, Moura IC, Hermine O, King PH, Si Y, Kwon Y, Barbeito L. (2019)

CD34 Identifies a Subset of Proliferating Microglial Cells Associated with Degenerating Motor Neurons in ALS.

Int J Mol Sci. Aug 9;20(16). pii: E3880. doi: 10.3390/ijms20163880
From the Gombart group:

Chen S, Ge L, Wang H, Cheng Y, Gorantla S, Poluektova LY, Gombart AF, Xie J. (2019)

Eluted 25-hydroxyvitamin D3 from Radially aligned Nanofiber Scaffolds Enhances Cathelicidin Production While Reducing Inflammatory Response in Human Immune System-Engrafted Mice.

Acta Biomater. Aug 3. pii: S1742-7061(19)30552-5. doi: 10.1016/j.actbio.2019.08.005. [Epub ahead of print]
From the Merrill group:

Shearn CT, Fennimore B, Orlicky DJ, Gao YR, Saba LM, Battista KD, Aivazidis S, Assiri M, Harris PS, Michel C, Merrill GF, Schmidt EE, Colgan SP, Petersen DR. (2019)

Cholestatic liver disease results increased production of reactive aldehydes and an atypical periportal hepatic antioxidant response.

Free Radic Biol Med. Aug 1;143:101-114. doi: 10.1016/j.freeradbiomed.2019.07.036. [Epub ahead of print]
From the Franco group:

Robinson MM, Sather BK, Burney ER, Ehrlicher SE, Stierwalt HD, Franco MC, Newsom SA. (2019)

Robust intrinsic differences in mitochondrial respiration and H2O2 emission between L6 and C2C12 cells.

Am J Physiol Cell Physiol. Aug 1. 317(2):C339-C347. doi: 10.1152/ajpcell.00343.2018. Epub May 15.
From the Hendrix group:

Sall K, Dekkers BJW, Nonogaki M, Katsuragawa Y, Koyari R, Hendrix D, Willems LAJ, Bentsink L, Nonogaki H. (2019)

DELAY OF GERMINATION1-LIKE4 acts as an inducer of seed reserve accumulation.

Plant J. Jul 29. doi: 10.1111/tpj.14485. [Epub ahead of print]

Biochemistry and Biophysics

You are here

Deoxyribonucleotide salvage falls short in whole animals.

The LC8-RavP ensemble structure evinces a role for LC8 in regulating Lyssavirus polymerase functionality.

Concatenation of 14-3-3 with partner phosphoproteins as a tool to study their interaction.

miRWoods: Enhanced precursor detection and stacked random forests for the sensitive detection of microRNAs.

Otoferlin C2F Domain-Induced Changes in Membrane Structure Observed by Sum Frequency Generation.

Otoferlin Depletion Results in Abnormal Synaptic Ribbons and Altered Intracellular Calcium Levels in Zebrafish.

Immobilization of Proteins with Controlled Load and Orientation.

LinearFold: linear-time approximate RNA folding by 5'-to-3' dynamic programming and beam search.

Innate immune dysfunction in rosacea promotes photosensitivity and vascular adhesion molecule expression.

The lncRNA Locus Handsdown Regulates Cardiac Gene Programs and Is Essential for Early Mouse Development.

CD34 Identifies a Subset of Proliferating Microglial Cells Associated with Degenerating Motor Neurons in ALS.

Eluted 25-hydroxyvitamin D3 from Radially aligned Nanofiber Scaffolds Enhances Cathelicidin Production While Reducing Inflammatory Response in Human Immune System-Engrafted Mice.

Cholestatic liver disease results increased production of reactive aldehydes and an atypical periportal hepatic antioxidant response.

Robust intrinsic differences in mitochondrial respiration and H2O2 emission between L6 and C2C12 cells.

DELAY OF GERMINATION1-LIKE4 acts as an inducer of seed reserve accumulation.

Pages

Contact Info

Contacts

Forms

Services

Helpful Links